Pull up the "Fonts" tab in File->Properties… and look for non-embedded fonts in the document. In this case, Helvetica is substituted wrongly.
<match target="pattern">
<test qual="any" name="family"><string>Helvetica</string></test>
<edit name="family" mode="assign" binding="same"><string>Arial</string></edit>
</match>
</fontconfig>
<test qual="any" name="family"><string>Helvetica</string></test>
<edit name="family" mode="assign" binding="same"><string>Arial</string></edit>
</match>
</fontconfig>
Afterwards, I ran fc-cache from a shell and checked whether the substitution was correct:
$ fc-cache
$ fc-match Helvetica
Arial.ttf: "Arial" "Normal"
Note: I didn't delve into why the substitution went wrong. Tex Gyre Hero actually seems to be working Helvetica substitute, and the weird bunching showed up all over the printout, not just in the sans serif parts. Whatever, it worked.
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